| Supplement 4: Tissue-selective genes used for Principal
Component Analysis |
| BRAIN |
|
|
|
|
|
| Significance |
Probe_Set |
LocusLink ID |
Accession # |
Name |
Symbol |
| 0 |
D87463_at |
9796 |
D87463 |
KIAA0273 gene product |
KIAA0273 |
| 0 |
L10373_at |
7102 |
L10373 |
transmembrane 4
superfamily member 2 |
TM4SF2 |
| 0 |
L13266_s_at |
2902 |
L13266 |
glutamate
receptor, ionotropic, N-methyl D-aspartate 1 |
GRIN1 |
| 0 |
S76475_at |
4916 |
S76475 |
neurotrophic
tyrosine kinase, receptor, type 3 |
NTRK3 |
| 0 |
U14747_at |
7447 |
U14747 |
visinin-like 1 |
VSNL1 |
| 0 |
D82343_at |
10439 |
D82343 |
neuroblastoma
(nerve tissue) protein |
AMY |
| 0.015 |
L10333_s_at |
6252 |
L10333 |
reticulon 1 |
RTN1 |
| 0 |
D50370_at |
4675 |
D50370 |
nucleosome
assembly protein 1-like 3 |
NAP1L3 |
| 0 |
U06681_at |
8194 |
U06681 |
protein tyrosine
phosphatase, non-receptor type substrate 1 |
PTPNS1 |
| 0 |
U39412_at |
8775 |
U39412 |
N-ethylmaleimide-sensitive
factor attachment protein, alpha |
NAPA |
| 0 |
X05196_at |
230 |
X05196 |
aldolase C,
fructose-bisphosphate |
ALDOC |
| 0 |
Z31560_s_at |
6657 |
Z31560 |
SRY -box 2 |
SOX2 |
| 0 |
D87074_at |
9783 |
D87074 |
KIAA0237 gene
product |
KIAA0237 |
| 0 |
L07807_s_at |
1759 |
L07807 |
dynamin 1 |
DNM1 |
| 0 |
D21267_at |
6616 |
D21267 |
synaptosomal-associated
protein, 25kD |
SNAP25 |
| KIDNEY |
|
|
|
|
|
| 0 |
J05257_at |
1800 |
J05257 |
dipeptidase 1 (renal) |
DPEP1 |
| 0 |
L13278_at |
1429 |
L13278 |
crystallin, zeta
(quinone reductase) |
CRYZ |
| 0 |
L33930_s_at |
934 |
L33930 |
CD24 antigen |
CD24 |
| 0 |
M14328_s_at |
2023 |
M14328 |
enolase 1,
(alpha) |
ENO1 |
| 0 |
M15881_at |
7369 |
M15881 |
uromodulin
(uromucoid, Tamm-Horsfall glycoprotein) |
UMOD |
| 0 |
M76180_at |
1644 |
M76180 |
dopa
decarboxylase |
DDC |
| 0 |
M93036_at |
4072 |
M93036 |
tumor-associated
calcium signal transducer 1 |
TACSTD1 |
| 0 |
U11862_s_at |
26 |
U11862 |
amiloride binding
protein 1 |
ABP1 |
| 0 |
U16799_s_at |
481 |
U16799 |
ATPase, Na+/K+
transporting, beta 1 polypeptide |
ATP1B1 |
| 0 |
U26726_at |
3291 |
U26726 |
hydroxysteroid
(11-beta) dehydrogenase 2 |
HSD11B2 |
| 0 |
U50743_at |
486 |
U50743 |
FXYD
domain-containing ion transport regulator 2 |
FXYD2 |
| 0 |
U58130_at |
6557 |
U58130 |
solute carrier
family 12 , member 1 |
SLC12A1 |
| 0 |
U65406_rna4_at |
3758 |
U65406 |
potassium
inwardly-rectifying channel, subfamily J, member 1 |
KCNJ1 |
| 0 |
U66036_at |
6819 |
U66036 |
sulfotransferase
family, cytosolic, 1C, member 1 |
SULT1C1 |
| LIVER |
|
|
|
|
|
| 0 |
U32989_at |
6999 |
U32989 |
tryptophan 2,3-dioxygenase |
TDO2 |
| 0 |
X07173_at |
3698 |
X07173 |
inter-alpha
(globulin) inhibitor, H2 polypeptide |
ITIH2 |
| 0 |
X15422_at |
4153 |
X15422 |
mannose-binding
lectin 2, soluble |
MBL2 |
| 0 |
X91148_at |
4547 |
X91148 |
microsomal
triglyceride transfer protein |
MTP |
| 0 |
K02402_at |
2158 |
K02402 |
coagulation
factor IX |
F9 |
| 0 |
M10058_at |
432 |
M10058 |
asialoglycoprotein
receptor 1 |
ASGR1 |
| 0 |
M17466_at |
2161 |
M17466 |
coagulation
factor XII (Hageman factor) |
F12 |
| 0 |
M61853_at |
1562 |
M61853 |
cytochrome P450,
subfamily IIC , polypeptide 18 |
CYP2C18 |
| 0 |
M61855_at |
1559 |
M61855 |
cytochrome P450,
subfamily IIC , polypeptide 9 |
CYP2C9 |
| 0 |
M93107_at |
622 |
M93107 |
3-hydroxybutyrate
dehydrogenase (heart, mitochondrial) |
BDH |
| 0 |
U08006_s_at |
731 |
U08006 |
complement
component 8, alpha polypeptide |
C8A |
| 0 |
U08198_rna1_at |
733 |
U08198 |
complement
component 8, gamma polypeptide |
C8G |
| 0 |
D49742_at |
3026 |
D49742 |
hyaluronan-binding
protein 2 |
HABP2 |
| LUNG |
|
|
|
|
|
| 0 |
AF000959_at |
7122 |
AF000959 |
claudin 5 |
CLDN5 |
| 0 |
HG2809-HT2920_s_at |
NA |
HG2809-HT2920 |
Lung Surfactant
prot D |
NA |
| 0 |
J02871_s_at |
1580 |
J02871 |
cytochrome P450,
subfamily IVB, polypeptide 1 |
CYP4B1 |
| 0 |
J03890_rna1_at |
6440 |
J03890 |
surfactant,
pulmonary-associated protein C |
SFTPC |
| 0 |
J03909_at |
10437 |
J03909 |
interferon,
gamma-inducible protein 30 |
IFI30 |
| 0 |
J04430_s_at |
54 |
J04430 |
acid phosphatase
5, tartrate resistant |
ACP5 |
| 0 |
M10321_s_at |
7450 |
M10321 |
von Willebrand
factor |
VWF |
| 0 |
M13686_s_at |
6435 |
M13686 |
pulmonary
surfactant-associated protein |
SFTP1 |
| 0 |
M24283_at |
3383 |
M24283 |
intercellular
adhesion molecule 1 , human rhinovirus receptor |
ICAM1 |
| 0 |
M24461_at |
6439 |
M24461 |
surfactant,
pulmonary-associated protein B |
SFTPB |
| 0 |
M30838_at |
6435 |
M30838 |
surfactant,
pulmonary-associated protein A1 |
SFTPA1 |
| 0 |
M33600_f_at |
3123 |
M33600 |
major
histocompatibility complex, class II, DR beta 1 |
HLA-DRB1 |
| 0 |
M57466_s_at |
3115 |
M57466 |
major
histocompatibility complex, class II, DP beta 1 |
HLA-DPB1 |
| 0 |
M68519_rna1_at |
6435 |
M68519 |
surfactant,
pulmonary-associated protein A1 |
SFTPA1 |
| MUSCLE |
|
|
|
|
|
| 0 |
AF001620_at |
4653 |
AF001620 |
myocilin, trabecular meshwork
inducible glucocorticoid response |
MYOC |
| 0 |
D21235_at |
5886 |
D21235 |
RAD23 (S.
cerevisiae) homolog A |
RAD23A |
| 0 |
HG2442-HT2538_at |
NA |
HG2442-HT2538 |
Tropomyosin Alpha 2 |
NA |
| 0 |
HG3513-HT3707_at |
NA |
HG3513-HT3707 |
\Myosin, Heavy
Polypeptide, Light Meromyosin\"" |
NA |
| 0 |
HG3627-HT3836_at |
NA |
HG3627-HT3836 |
Calcium
Channel Voltage-Gated Beta 1 Subunit L Type 2 |
NA |
| 0 |
HG4011-HT4804_s_at |
NA |
HG4011-HT4804 |
\Dystrophin-Associated
Glycoprot, 50 Kda\"" |
NA |
| 0 |
HG4334-HT4604_s_at |
NA |
HG4334-HT4604 |
Glycogenin |
NA |
| 0 |
HG4749-HT5197_at |
NA |
HG4749-HT5197 |
Carnitine
Calcium-Binding prot Mitochondrial |
NA |
| 0 |
J04982_at |
291 |
J04982 |
solute carrier
family 25 , member 4 |
SLC25A4 |
| 0 |
J05073_at |
5224 |
J05073 |
phosphoglycerate
mutase 2 (muscle) |
PGAM2 |
| 0 |
J05200_rna1_s_at |
6261 |
J05200 |
ryanodine
receptor 1 (skeletal) |
RYR1 |
| 0 |
J05401_at |
1160 |
J05401 |
creatine kinase,
mitochondrial 2 (sarcomeric) |
CKMT2 |
| 0 |
L07738_at |
786 |
L07738 |
calcium channel,
voltage-dependent, gamma subunit 1 |
CACNG1 |
| 0 |
L16842_at |
7384 |
L16842 |
ubiquinol-cytochrome
c reductase core protein I |
UQCRC1 |
| Prostate |
|
|
|
|
|
| 0 |
D13315_at |
2739 |
D13315 |
glyoxalase I |
GLO1 |
| 0 |
HG2261-HT2351_s_at |
|
HG2261-HT2351 |
\Antigen,
Prostate Specific\"" |
NA |
| 0 |
J03241_s_at |
7043 |
J03241 |
transforming
growth factor, beta 3 |
TGFB3 |
| 0 |
K01911_at |
4852 |
K01911 |
neuropeptide Y |
NPY |
| 0 |
L19779_at |
8337 |
L19779 |
H2A histone
family, member O |
H2AFO |
| 0 |
M24902_at |
55 |
M24902 |
acid phosphatase,
prostate |
ACPP |
| 0 |
M30894_at |
6965 |
M30894 |
T cell receptor
gamma locus |
TRG@ |
| 0 |
M34376_s_at |
4477 |
M34376 |
microseminoprotein,
beta- |
MSMB |
| 0 |
M62994_at |
2317 |
M62994 |
filamin B, beta
(actin-binding protein-278) |
FLNB |
| 0 |
S39329_at |
3817 |
S39329 |
kallikrein 2,
prostatic |
KLK2 |
| 0 |
U07919_at |
220 |
U07919 |
aldehyde
dehydrogenase 6 |
ALDH6 |
| 0 |
U22178_s_at |
4477 |
U22178 |
microseminoprotein,
beta- |
MSMB |
| 0 |
U39840_at |
3169 |
U39840 |
hepatocyte
nuclear factor 3, alpha |
HNF3A |
| 0 |
U41060_at |
25800 |
U41060 |
LIV-1 protein,
estrogen regulated |
LIV-1 |
| VULVA |
|
|
|
|
|
| 0 |
AB001325_at |
360 |
AB001325 |
aquaporin 3 |
AQP3 |
| 0 |
HG2271-HT2367_s_at |
|
HG2271-HT2367 |
Profilaggrin |
NA |
| 0 |
J00124_at |
3861 |
J00124 |
keratin 14 |
KRT14 |
| 0 |
J04029_s_at |
3858 |
J04029 |
keratin 10 |
KRT10 |
| 0 |
L33404_at |
5650 |
L33404 |
kallikrein 7
(chymotryptic, stratum corneum) |
KLK7 |
| 0 |
M60503_at |
NA |
M60503 |
profilaggrin |
NA |
| 0 |
M86757_s_at |
6278 |
M86757 |
S100
calcium-binding protein A7 |
S100A7 |
| 0 |
M94077_at |
4014 |
M94077 |
loricrin |
LOR |
| 0 |
M98776_rna1_at |
3848 |
M98776 |
keratin 1
(epidermolytic hyperkeratosis) |
KRT1 |
| 0 |
U06643_s_at |
3963 |
U06643 |
lectin,
galactoside-binding, soluble, 7 |
LGALS7 |
| 0 |
U42408_at |
3898 |
U42408 |
ladinin 1 |
LAD1 |
| 0 |
U62800_at |
1474 |
U62800 |
cystatin E/M |
CST6 |
| 0 |
X13461_s_at |
810 |
X13461 |
calmodulin-like 3 |
CALML3 |
|
|
|
|
|
|